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ReactionNetworks :: modificationOfTwoSubstratesI

modificationOfTwoSubstratesI -- an example chemical reaction motif

Description

In this system, two cycles are connected through a joint catalyzing kinase and a joint catalyzing phosphotase [Feliu, Wiuf].

i1 : modificationOfTwoSubstratesI()

o1 = S_0+E-->X_1
     X_1-->S_0+E
     X_1-->E+S_1
     S_1+F-->Y_1
     Y_1-->S_1+F
     Y_1-->S_0+F
     E+P_0-->X_2
     X_2-->E+P_0
     X_2-->E+P_1
     F+P_1-->Y_2
     Y_2-->F+P_1
     Y_2-->F+P_0

o1 : ReactionNetwork

In the motif Modification of Two Different Substrates I, the symbols used in the chemical reactions have the following meaning:

S_i and P_i are substrates with i = 0, 1, 2 phosphorylated sites, E is a kinase and F is a phosphotase, X and Y are the intermediate complexes formed by the enzymes E and F, respectively.

To rename species, use substitute(ReactionNetwork,List).

Ways to use modificationOfTwoSubstratesI :

For the programmer

The object modificationOfTwoSubstratesI is a method function.